Merge branch 'master' of github.com:adamhrv/megapixels_dev

1 files changed, 58 insertions, 0 deletions

diff --git a/megapixels/commands/datasets/fix_identity_key.py b/megapixels/commands/datasets/fix_identity_key.py
new file mode 100644
index 00000000..ad2b555f
--- /dev/null
+++ b/megapixels/commands/datasets/fix_identity_key.py
@@ -0,0 +1,58 @@
+'''
+
+'''
+import click
+
+from app.settings import types
+from app.utils import click_utils
+from app.settings import app_cfg as cfg
+from app.utils.logger_utils import Logger
+
+log = Logger.getLogger()
+
+
+identity_sources = ['subdir', 'numeric']
+
+@click.command()
+@click.option('--data_store', 'opt_data_store',
+  type=cfg.DataStoreVar,
+  default=click_utils.get_default(types.DataStore.HDD),
+  show_default=True,
+  help=click_utils.show_help(types.Dataset))
+@click.option('--dataset', 'opt_dataset',
+  type=cfg.DatasetVar,
+  required=True,
+  show_default=True,
+  help=click_utils.show_help(types.Dataset))
+@click.pass_context
+def cli(ctx, opt_dataset, opt_data_store):
+  """Fix identity key to be slug"""
+  
+  import sys, os
+  from glob import glob
+  from os.path import join
+  from pathlib import Path
+
+  import pandas as pd
+  from glob import glob
+  from slugify import slugify
+  from tqdm import tqdm
+
+  from app.models.data_store import DataStore
+
+
+  data_store = DataStore(opt_data_store, opt_dataset)
+  fp_records = data_store.metadata(types.Metadata.FILE_RECORD)
+
+  
+  # ----------------------------------------------------------------
+  # load csv and slugify
+
+  df_records = pd.read_csv(fp_records, dtype=cfg.FILE_RECORD_DTYPES).set_index('index')
+  records = df_records.to_dict('records')
+  for r in tqdm(records):
+    r['identity_key'] = slugify(r['identity_key'], separator='_')
+  df_records = pd.DataFrame.from_dict(records)
+  df_records.index.name = 'index'
+  df_records.to_csv(fp_records)
+  log.info(f'wrote: {fp_records}')
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